HL_5J7L_017

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases (A, C, G, U)

793U

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_12326.2

Basepair signature

cWW-F-F-tSH-F-F

Number of instances in this motif group

10

Unit IDs

5J7L|1|AA|G|786
5J7L|1|AA|A|787
5J7L|1|AA|U|788
5J7L|1|AA|U|789
5J7L|1|AA|A|790
5J7L|1|AA|G|791
5J7L|1|AA|A|792
5J7L|1|AA|U|793
5J7L|1|AA|A|794
5J7L|1|AA|C|795
5J7L|1|AA|C|796

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AK

30S ribosomal protein S11

Chain AU

30S ribosomal protein S21

Chain DA

Large subunit ribosomal RNA; LSU rRNA