3D structure

PDB id
5J7L (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GUUAAGUC
Length
8 nucleotides
Bulged bases
5J7L|1|AA|G|1094
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_77436.2
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
23

Unit IDs

5J7L|1|AA|G|1089
5J7L|1|AA|U|1090
5J7L|1|AA|U|1091
5J7L|1|AA|A|1092
5J7L|1|AA|A|1093
5J7L|1|AA|G|1094
5J7L|1|AA|U|1095
5J7L|1|AA|C|1096

Current chains

Chain AA
16S rRNA

Nearby chains

Chain AB
30S ribosomal protein S2
Chain AG
30S ribosomal protein S7

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.5427 s