HL_5J7L_029

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAUCAGAAUGC

Length

11 nucleotides

Bulged bases (A, C, G, U)

1364U

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96366.1

Basepair signature

cWW-cWW-tWW-F-F-F-F

Number of instances in this motif group

3

Unit IDs

5J7L|1|AA|G|1356
5J7L|1|AA|A|1357
5J7L|1|AA|U|1358
5J7L|1|AA|C|1359
5J7L|1|AA|A|1360
5J7L|1|AA|G|1361
5J7L|1|AA|A|1362
5J7L|1|AA|A|1363
5J7L|1|AA|U|1364
5J7L|1|AA|G|1365
5J7L|1|AA|C|1366

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AC

30S ribosomal protein S3

Chain AI

30S ribosomal protein S9

Chain AJ

30S ribosomal protein S10

Chain AN

30S ribosomal protein S14