HL_5J7L_039
3D structure
- PDB id
- 5J7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AACUGAGACACGGU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5J7L_039 not in the Motif Atlas
- Homologous match to HL_5J7L_008
- Geometric discrepancy: 0.0077
- The information below is about HL_5J7L_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.3
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5J7L|1|BA|A|320
5J7L|1|BA|A|321
5J7L|1|BA|C|322
5J7L|1|BA|U|323
5J7L|1|BA|G|324
5J7L|1|BA|A|325
5J7L|1|BA|G|326
5J7L|1|BA|A|327
5J7L|1|BA|C|328
5J7L|1|BA|A|329
5J7L|1|BA|C|330
5J7L|1|BA|G|331
5J7L|1|BA|G|332
5J7L|1|BA|U|333
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BP
- 30S ribosomal protein S16
- Chain BT
- 30S ribosomal protein S20
Coloring options: