HL_5J7L_049

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

5J7L|1|BA|U|843, 5J7L|1|BA|G|844

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5J7L_049 not in the Motif Atlas

Geometric match to HL_4V9F_019

Geometric discrepancy: 0.3994

The information below is about HL_4V9F_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

3

Unit IDs

5J7L|1|BA|C|840
5J7L|1|BA|C|841
5J7L|1|BA|U|842
5J7L|1|BA|U|843
5J7L|1|BA|G|844
5J7L|1|BA|A|845
5J7L|1|BA|G|846

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BB

30S ribosomal protein S2

Chain BR

30S ribosomal protein S18