HL_5J7L_085

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

5J7L|1|CA|A|781, 5J7L|1|CA|G|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5J7L_085 not in the Motif Atlas

Geometric match to HL_6JQ6_004

Geometric discrepancy: 0.3339

The information below is about HL_6JQ6_004

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

5J7L|1|CA|U|779
5J7L|1|CA|G|780
5J7L|1|CA|A|781
5J7L|1|CA|A|782
5J7L|1|CA|A|783
5J7L|1|CA|G|784
5J7L|1|CA|G|785

Current chains

Chain CA

23S rRNA

Nearby chains

Chain CC

50S ribosomal protein L2