HL_5J7L_113

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

5J7L|1|CA|C|2145

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5J7L_113 not in the Motif Atlas

Homologous match to HL_5J7L_184

Geometric discrepancy: 0.4039

The information below is about HL_5J7L_184

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79299.1

Basepair signature

cWW-tSW-R

Number of instances in this motif group

44

Unit IDs

5J7L|1|CA|C|2143
5J7L|1|CA|G|2144
5J7L|1|CA|C|2145
5J7L|1|CA|C|2146
5J7L|1|CA|A|2147
5J7L|1|CA|G|2148

Current chains

Chain CA

23S rRNA

Nearby chains