HL_5J7L_138

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGAAUCCAUAG

Length

11 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81820.1

Basepair signature

cWW-tSH-tHW-tHW-cSH-F

Number of instances in this motif group

1

Unit IDs

5J7L|1|DA|U|158
5J7L|1|DA|G|159
5J7L|1|DA|A|160
5J7L|1|DA|A|161
5J7L|1|DA|U|162
5J7L|1|DA|C|163
5J7L|1|DA|C|164
5J7L|1|DA|A|165
5J7L|1|DA|U|166
5J7L|1|DA|A|167
5J7L|1|DA|G|168

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DY

50S ribosomal protein L28