Motif HL_68257.1 Version HL_68257.1 of this group appears in releases 3.90 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 4-7 | 7-8 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_7A0S_075 | 7A0S | 0.0000 | 4 | X | LSU rRNA | A | 253 | A | 254 | A | 255 | C | 256 | G | 257 | C | 258 | G | 263 | U | 264 | U | 265 | U | 266 | ncWW | ncWW | ncSH | ||
| 2 | HL_5J7L_138 | 5J7L | 0.8587 | 1 | DA | LSU rRNA | U | 158 | G | 159 | A | 160 | A | 161 | U | 162 | C | 163 | A | 165 | U | 166 | A | 167 | G | 168 | cWW | tSH | tHW | tHW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAACGCUUGCGUUU | 1 |
| UGAAUCCAUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AACGCUUGCGUU | 1 |
| GAAUCCAUA | 1 |
Release history
| Release | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.86 | Avg 0.43 | Max 0.86
Coloring options: