3D structure

PDB id
5J7L (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
ACACGUGGUAU
Length
11 nucleotides
Bulged bases
5J7L|1|DA|G|386, 5J7L|1|DA|G|389
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_91503.6
Basepair signature
cWW-cWW-F-F-F-F-F-F
Number of instances in this motif group
3

Unit IDs

5J7L|1|DA|A|382
5J7L|1|DA|C|383
5J7L|1|DA|A|384
5J7L|1|DA|C|385
5J7L|1|DA|G|386
5J7L|1|DA|U|387
5J7L|1|DA|G|388
5J7L|1|DA|G|389
5J7L|1|DA|U|390
5J7L|1|DA|A|391
5J7L|1|DA|U|392

Current chains

Chain DA
23S rRNA

Nearby chains

Chain D4
50S ribosomal protein L35
Chain DY
50S ribosomal protein L28

Coloring options:

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