HL_5J7L_155

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

U(1MG)(PSU)(5MU)GAAAAA

Length

10 nucleotides

Bulged bases

5J7L|1|DA|A|751, 5J7L|1|DA|A|752

QA status

Modified nucleotides: 1MG, PSU, 5MU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_88205.2

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

7

Unit IDs

5J7L|1|DA|U|744
5J7L|1|DA|1MG|745
5J7L|1|DA|PSU|746
5J7L|1|DA|5MU|747
5J7L|1|DA|G|748
5J7L|1|DA|A|749
5J7L|1|DA|A|750
5J7L|1|DA|A|751
5J7L|1|DA|A|752
5J7L|1|DA|A|753

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D1

50S ribosomal protein L32

Chain D3

50S ribosomal protein L34

Chain DD

50S ribosomal protein L3

Chain DT

50S ribosomal protein L22