HL_5J7L_162
3D structure
- PDB id
- 5J7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GAAAGCGUAAUAGCUC
- Length
- 16 nucleotides
- Bulged bases
- 5J7L|1|DA|A|1088
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_04775.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5J7L|1|DA|G|1087
5J7L|1|DA|A|1088
5J7L|1|DA|A|1089
5J7L|1|DA|A|1090
5J7L|1|DA|G|1091
5J7L|1|DA|C|1092
5J7L|1|DA|G|1093
5J7L|1|DA|U|1094
5J7L|1|DA|A|1095
5J7L|1|DA|A|1096
5J7L|1|DA|U|1097
5J7L|1|DA|A|1098
5J7L|1|DA|G|1099
5J7L|1|DA|C|1100
5J7L|1|DA|U|1101
5J7L|1|DA|C|1102
Current chains
- Chain DA
- 23S rRNA
Nearby chains
- Chain D5
- 50S ribosomal protein L36
- Chain DG
- 50S ribosomal protein L6
- Chain DJ
- 50S ribosomal protein L11
Coloring options: