#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 8 9 10 11 12 13 14 151-152-33-144-134-145-125-136-106-11
1 HL_5J7L_1625J7L0.88881 DA LSU rRNAG1087A1089A1090G1091C1092G1093U1094A1095A1096U1097A1098G1099C1100U1101C1102cWWncSHncWWcWWncWSncWWncWWtSH
2 HL_2QWY_0032QWY0.00002 CSAM-II riboswitchA24G25U26C27G28C29G30U31G32A33A35A36A37U38U40cWWncSScSScSW

3D structures

Complete motif including flanking bases
SequenceCounts
GAAAGCGUAAUAGCUC1
AGUCGCGUGAUAAAUGU1
Non-Watson-Crick part of the motif
SequenceCounts
AAAGCGUAAUAGCU1
GUCGCGUGAUAAAUG1

Release history

Release3.773.783.793.803.813.823.833.843.853.863.87
Date2023-12-062024-01-032024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-14
StatusNew id, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW-F-F-F-F-F-F-F-F-F-F-F-F-F
Heat map statistics
Min 0.89 | Avg 0.44 | Max 0.89
Help

Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 0.1026 s