3D structure

PDB id
5J7L (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CGAAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.2
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
360

Unit IDs

5J7L|1|DA|C|1363
5J7L|1|DA|G|1364
5J7L|1|DA|A|1365
5J7L|1|DA|A|1366
5J7L|1|DA|A|1367
5J7L|1|DA|G|1368

Current chains

Chain DA
23S rRNA

Nearby chains

Chain D3
50S ribosomal protein L34
Chain DY
50S ribosomal protein L28

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.3954 s