HL_5J7L_174

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AGAGAAU

Length

7 nucleotides

Bulged bases

5J7L|1|DA|A|1634

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

GNRA with one bulged base

Broad Annotation

GNRA

Motif group

HL_85603.1

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

304

Unit IDs

5J7L|1|DA|A|1630
5J7L|1|DA|G|1631
5J7L|1|DA|A|1632
5J7L|1|DA|G|1633
5J7L|1|DA|A|1634
5J7L|1|DA|A|1635
5J7L|1|DA|U|1636

Current chains

Chain DA

23S rRNA

Nearby chains