HL_5J91_034

3D structure

PDB id

5J91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Wild-type 70S E coli ribosome bound to Tigecycline

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5J91_034 not in the Motif Atlas

Homologous match to HL_5J7L_003

Geometric discrepancy: 0.0472

The information below is about HL_5J7L_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

5J91|1|BA|G|158
5J91|1|BA|G|159
5J91|1|BA|A|160
5J91|1|BA|A|161
5J91|1|BA|A|162
5J91|1|BA|C|163

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BT

30S ribosomal protein S20

Chain CQ

50S ribosomal protein L19