HL_5J91_047

3D structure

PDB id

5J91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Wild-type 70S E coli ribosome bound to Tigecycline

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

CGAAGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5J91_047 not in the Motif Atlas

Homologous match to HL_5J7L_016

Geometric discrepancy: 0.0451

The information below is about HL_5J7L_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

5J91|1|BA|C|726
5J91|1|BA|G|727
5J91|1|BA|A|728
5J91|1|BA|A|729
5J91|1|BA|G|730
5J91|1|BA|G|731

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BO

30S ribosomal protein S15

Chain BU

30S ribosomal protein S21