HL_5J91_217
3D structure
- PDB id
- 5J91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Wild-type 70S E coli ribosome bound to Tigecycline
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.96 Å
Loop
- Sequence
- UUCAGAGAUGAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5J91_217 not in the Motif Atlas
- Homologous match to HL_5J7L_216
- Geometric discrepancy: 0.0258
- The information below is about HL_5J7L_216
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78284.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5J91|1|AA|U|1009
5J91|1|AA|U|1010
5J91|1|AA|C|1011
5J91|1|AA|A|1012
5J91|1|AA|G|1013
5J91|1|AA|A|1014
5J91|1|AA|G|1015
5J91|1|AA|A|1016
5J91|1|AA|U|1017
5J91|1|AA|G|1018
5J91|1|AA|A|1019
5J91|1|AA|G|1020
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AN
- 30S ribosomal protein S14
- Chain AS
- 30S ribosomal protein S19
Coloring options: