HL_5JB3_008

3D structure

PDB id

5JB3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-REMOTE conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

5.34 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5JB3|1|2|C|316
5JB3|1|2|A|317
5JB3|1|2|C|318
5JB3|1|2|U|319
5JB3|1|2|G|320
5JB3|1|2|A|321
5JB3|1|2|G|322
5JB3|1|2|A|323
5JB3|1|2|C|324
5JB3|1|2|A|325
5JB3|1|2|C|326
5JB3|1|2|G|327
5JB3|1|2|G|328
5JB3|1|2|G|329

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain E

30S ribosomal protein S4e

Chain G

30S ribosomal protein S6e

Chain J

30S ribosomal protein S8e