5JB3 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_5JB3_001 | No text annotation | ||
| HL_5JB3_035 | No text annotation | ||
| HL_5JB3_002 | No text annotation | ||
| HL_5JB3_003 | No text annotation | ||
| HL_5JB3_004 | No text annotation | ||
| HL_5JB3_005 | No text annotation | ||
| HL_5JB3_006 | No text annotation | ||
| HL_5JB3_007 | No text annotation | ||
| HL_5JB3_008 | No text annotation | ||
| HL_5JB3_009 | No text annotation | ||
| HL_5JB3_010 | No text annotation | ||
| HL_5JB3_011 | No text annotation | ||
| HL_5JB3_012 | No text annotation | ||
| HL_5JB3_013 | No text annotation | ||
| HL_5JB3_014 | No text annotation | ||
| HL_5JB3_036 | No text annotation | ||
| HL_5JB3_015 | No text annotation | ||
| HL_5JB3_016 | No text annotation | ||
| HL_5JB3_017 | No text annotation | ||
| HL_5JB3_018 | No text annotation | ||
| HL_5JB3_019 | No text annotation | ||
| HL_5JB3_020 | No text annotation | ||
| HL_5JB3_021 | No text annotation | ||
| HL_5JB3_022 | No text annotation | ||
| HL_5JB3_023 | No text annotation | ||
| HL_5JB3_024 | No text annotation | ||
| HL_5JB3_025 | No text annotation | ||
| HL_5JB3_026 | No text annotation | ||
| HL_5JB3_027 | No text annotation | ||
| HL_5JB3_028 | No text annotation | ||
| HL_5JB3_029 | No text annotation | ||
| HL_5JB3_038 | No text annotation | ||
| HL_5JB3_030 | No text annotation | ||
| HL_5JB3_031 | No text annotation | ||
| HL_5JB3_032 | tRNA D-loop | ||
| HL_5JB3_033 | tRNA anticodon loop | ||
| HL_5JB3_037 | No text annotation | ||
| HL_5JB3_034 | T-loop with 2 stacked bulged bases |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_5JB3_006 | 1/2/111:113, 1/2/228:230 | No text annotation | ||
| IL_5JB3_009 | 1/2/133:138, 1/2/153:159 | No text annotation | ||
| IL_5JB3_024 | 1/2/608:609, 1/2/705:708 | No text annotation | ||
| IL_5JB3_049 | 1/2/1359:1361, 1/2/1456:1459 | No text annotation | ||
| IL_5JB3_053 | 1/2/1372:1374, 1/2/1441:1443 | No text annotation | ||
| IL_5JB3_069 | 1/2/1462:1464, 1/2/1481:1483 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_5JB3_001 | No text annotation | ||
| IL_5JB3_002 | No text annotation | ||
| IL_5JB3_003 | No text annotation | ||
| IL_5JB3_057 | No text annotation | ||
| IL_5JB3_058 | No text annotation | ||
| IL_5JB3_004 | No text annotation | ||
| IL_5JB3_005 | No text annotation | ||
| IL_5JB3_007 | No text annotation | ||
| IL_5JB3_008 | No text annotation | ||
| IL_5JB3_059 | No text annotation | ||
| IL_5JB3_010 | No text annotation | ||
| IL_5JB3_011 | No text annotation | ||
| IL_5JB3_012 | No text annotation | ||
| IL_5JB3_013 | No text annotation | ||
| IL_5JB3_014 | No text annotation | ||
| IL_5JB3_015 | No text annotation | ||
| IL_5JB3_016 | No text annotation | ||
| IL_5JB3_017 | No text annotation | ||
| IL_5JB3_060 | No text annotation | ||
| IL_5JB3_018 | No text annotation | ||
| IL_5JB3_019 | No text annotation | ||
| IL_5JB3_020 | No text annotation | ||
| IL_5JB3_021 | No text annotation | ||
| IL_5JB3_022 | No text annotation | ||
| IL_5JB3_065 | No text annotation | ||
| IL_5JB3_023 | No text annotation | ||
| IL_5JB3_025 | No text annotation | ||
| IL_5JB3_026 | No text annotation | ||
| IL_5JB3_027 | No text annotation | ||
| IL_5JB3_066 | No text annotation | ||
| IL_5JB3_028 | No text annotation | ||
| IL_5JB3_029 | No text annotation | ||
| IL_5JB3_030 | No text annotation | ||
| IL_5JB3_031 | No text annotation | ||
| IL_5JB3_032 | No text annotation | ||
| IL_5JB3_033 | No text annotation | ||
| IL_5JB3_034 | No text annotation | ||
| IL_5JB3_035 | No text annotation | ||
| IL_5JB3_036 | No text annotation | ||
| IL_5JB3_037 | No text annotation | ||
| IL_5JB3_038 | No text annotation | ||
| IL_5JB3_039 | No text annotation | ||
| IL_5JB3_040 | No text annotation | ||
| IL_5JB3_061 | No text annotation | ||
| IL_5JB3_041 | No text annotation | ||
| IL_5JB3_067 | No text annotation | ||
| IL_5JB3_042 | No text annotation | ||
| IL_5JB3_062 | No text annotation | ||
| IL_5JB3_043 | No text annotation | ||
| IL_5JB3_068 | No text annotation | ||
| IL_5JB3_044 | No text annotation | ||
| IL_5JB3_045 | No text annotation | ||
| IL_5JB3_046 | No text annotation | ||
| IL_5JB3_047 | No text annotation | ||
| IL_5JB3_048 | No text annotation | ||
| IL_5JB3_050 | No text annotation | ||
| IL_5JB3_051 | No text annotation | ||
| IL_5JB3_063 | No text annotation | ||
| IL_5JB3_052 | No text annotation | ||
| IL_5JB3_064 | No text annotation | ||
| IL_5JB3_054 | No text annotation | ||
| IL_5JB3_055 | No text annotation | ||
| IL_5JB3_056 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_5JB3_002 | 1/2/539:541, 1/2/605:608, 1/2/708:709 | No text annotation | ||
| J3_5JB3_012 | 1/2/539:541, 1/2/605:609, 1/2/705:709 | No text annotation | ||
| J3_5JB3_003 | 1/2/625:627, 1/2/671:679, 1/2/686:689 | No text annotation | ||
| J3_5JB3_004 | 1/2/780:783, 1/2/815:819, 1/2/826:832 | No text annotation | ||
| J3_5JB3_009 | 1/2/1025:1027, 1/2/1034:1038, 1/2/1051:1054 | No text annotation | ||
| J4_5JB3_001 | 1/2/99:107, 1/2/234:236, 1/2/282:285, 1/2/307:308 | No text annotation | ||
| J4_5JB3_005 | 1/2/522:531, 1/2/717:722, 1/2/765:775, 1/2/837:839 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_5JB3_001 | No text annotation | ||
| J3_5JB3_015 | No text annotation | ||
| J3_5JB3_013 | No text annotation | ||
| J3_5JB3_005 | No text annotation | ||
| J3_5JB3_006 | No text annotation | ||
| J3_5JB3_007 | No text annotation | ||
| J3_5JB3_016 | No text annotation | ||
| J3_5JB3_008 | No text annotation | ||
| J3_5JB3_014 | No text annotation | ||
| J3_5JB3_010 | No text annotation | ||
| J3_5JB3_011 | No text annotation | ||
| J4_5JB3_002 | No text annotation | ||
| J4_5JB3_003 | No text annotation | ||
| J4_5JB3_004 | tRNA junction | ||
| J5_5JB3_001 | No text annotation | ||
| J5_5JB3_002 | No text annotation |
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