HL_5JCS_004
3D structure
- PDB id
- 5JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- GUGAGAAUCC
- Length
- 10 nucleotides
- Bulged bases
- 5JCS|1|x|G|218, 5JCS|1|x|A|219, 5JCS|1|x|G|220
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5JCS|1|x|G|216
5JCS|1|x|U|217
5JCS|1|x|G|218
5JCS|1|x|A|219
5JCS|1|x|G|220
5JCS|1|x|A|221
5JCS|1|x|A|222
5JCS|1|x|U|223
5JCS|1|x|C|224
5JCS|1|x|C|225
Current chains
- Chain x
- 25S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain Y
- 60S ribosomal protein L26-A
- Chain y
- 5.8S ribosomal RNA; 5.8S rRNA
Coloring options: