HL_5JCS_006
3D structure
- PDB id
- 5JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- GGUGGUAAAUUCCAUC
- Length
- 16 nucleotides
- Bulged bases
- 5JCS|1|x|G|304, 5JCS|1|x|U|305
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5JCS|1|x|G|300
5JCS|1|x|G|301
5JCS|1|x|U|302
5JCS|1|x|G|303
5JCS|1|x|G|304
5JCS|1|x|U|305
5JCS|1|x|A|306
5JCS|1|x|A|307
5JCS|1|x|A|308
5JCS|1|x|U|309
5JCS|1|x|U|310
5JCS|1|x|C|311
5JCS|1|x|C|312
5JCS|1|x|A|313
5JCS|1|x|U|314
5JCS|1|x|C|315
Current chains
- Chain x
- 25S ribosomal RNA
Nearby chains
- Chain L
- 60S ribosomal protein L13-A
- Chain N
- 60S ribosomal protein L15-A
- Chain a
- 60S ribosomal protein L28
- Chain i
- 60S ribosomal protein L36-A
Coloring options: