HL_5JCS_046
3D structure
- PDB id
- 5JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- GCAGUCAAGCGUUCAUAGCGACAUUGC
- Length
- 27 nucleotides
- Bulged bases
- 5JCS|1|x|U|2842
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5JCS|1|x|G|2831
5JCS|1|x|C|2832
5JCS|1|x|A|2833
5JCS|1|x|G|2834
5JCS|1|x|U|2835
5JCS|1|x|C|2836
5JCS|1|x|A|2837
5JCS|1|x|A|2838
5JCS|1|x|G|2839
5JCS|1|x|C|2840
5JCS|1|x|G|2841
5JCS|1|x|U|2842
5JCS|1|x|U|2843
5JCS|1|x|C|2844
5JCS|1|x|A|2845
5JCS|1|x|U|2846
5JCS|1|x|A|2847
5JCS|1|x|G|2848
5JCS|1|x|C|2849
5JCS|1|x|G|2850
5JCS|1|x|A|2851
5JCS|1|x|C|2852
5JCS|1|x|A|2853
5JCS|1|x|U|2854
5JCS|1|x|U|2855
5JCS|1|x|G|2856
5JCS|1|x|C|2857
Current chains
- Chain x
- 25S ribosomal RNA
Nearby chains
- Chain S
- 60S ribosomal protein L20-A
- Chain T
- 60S ribosomal protein L21-A
- Chain o
- Nucleolar GTP-binding protein 1
- Chain q
- Ribosome assembly protein 4
- Chain z
- 5S ribosomal RNA; 5S rRNA
Coloring options: