HL_5JCS_072
3D structure
- PDB id
- 5JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- UCUGAAUGUCAAAGUGAAGAAAUUCAACCAAGCGCGG
- Length
- 37 nucleotides
- Bulged bases
- 5JCS|1|x|U|2205, 5JCS|1|x|U|2209, 5JCS|1|x|A|2222
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5JCS|1|x|U|2203
5JCS|1|x|C|2204
5JCS|1|x|U|2205
5JCS|1|x|G|2206
5JCS|1|x|A|2207
5JCS|1|x|A|2208
5JCS|1|x|U|2209
5JCS|1|x|G|2210
5JCS|1|x|U|2211
5JCS|1|x|C|2212
5JCS|1|x|A|2213
5JCS|1|x|A|2214
5JCS|1|x|A|2215
5JCS|1|x|G|2216
5JCS|1|x|U|2217
5JCS|1|x|G|2218
5JCS|1|x|A|2219
5JCS|1|x|A|2220
5JCS|1|x|G|2221
5JCS|1|x|A|2222
5JCS|1|x|A|2223
5JCS|1|x|A|2224
5JCS|1|x|U|2225
5JCS|1|x|U|2226
5JCS|1|x|C|2227
5JCS|1|x|A|2228
5JCS|1|x|A|2229
5JCS|1|x|C|2230
5JCS|1|x|C|2231
5JCS|1|x|A|2232
5JCS|1|x|A|2233
5JCS|1|x|G|2234
5JCS|1|x|C|2235
5JCS|1|x|G|2236
5JCS|1|x|C|2237
5JCS|1|x|G|2238
5JCS|1|x|G|2239
Current chains
- Chain x
- 25S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain i
- 60S ribosomal protein L36-A
- Chain r
- Protein SDA1
Coloring options: