HL_5JCS_077
3D structure
- PDB id
- 5JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- UUUUUGCGGCUGUCUGAUCAGGCAUUGCCGCGAAG
- Length
- 35 nucleotides
- Bulged bases
- 5JCS|1|x|U|3056, 5JCS|1|x|U|3057, 5JCS|1|x|U|3058, 5JCS|1|x|U|3078, 5JCS|1|x|U|3079
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5JCS|1|x|U|3054
5JCS|1|x|U|3055
5JCS|1|x|U|3056
5JCS|1|x|U|3057
5JCS|1|x|U|3058
5JCS|1|x|G|3059
5JCS|1|x|C|3060
5JCS|1|x|G|3061
5JCS|1|x|G|3062
5JCS|1|x|C|3063
5JCS|1|x|U|3064
5JCS|1|x|G|3065
5JCS|1|x|U|3066
5JCS|1|x|C|3067
5JCS|1|x|U|3068
5JCS|1|x|G|3069
5JCS|1|x|A|3070
5JCS|1|x|U|3071
5JCS|1|x|C|3072
5JCS|1|x|A|3073
5JCS|1|x|G|3074
5JCS|1|x|G|3075
5JCS|1|x|C|3076
5JCS|1|x|A|3077
5JCS|1|x|U|3078
5JCS|1|x|U|3079
5JCS|1|x|G|3080
5JCS|1|x|C|3081
5JCS|1|x|C|3082
5JCS|1|x|G|3083
5JCS|1|x|C|3084
5JCS|1|x|G|3085
5JCS|1|x|A|3086
5JCS|1|x|A|3087
5JCS|1|x|G|3088
Current chains
- Chain x
- 25S ribosomal RNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain R
- 60S ribosomal protein L19-A
- Chain d
- 60S ribosomal protein L31-A
- Chain t
- Ribosome biogenesis protein RLP24
Coloring options: