HL_5JTE_091

3D structure

PDB id

5JTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

5JTE|1|BA|C|2145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5JTE_091 not in the Motif Atlas

Homologous match to HL_5J7L_184

Geometric discrepancy: 0.314

The information below is about HL_5J7L_184

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79299.1

Basepair signature

cWW-tSW-R

Number of instances in this motif group

44

Unit IDs

5JTE|1|BA|C|2143
5JTE|1|BA|G|2144
5JTE|1|BA|C|2145
5JTE|1|BA|C|2146
5JTE|1|BA|A|2147
5JTE|1|BA|G|2148

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AK

30S ribosomal protein S11

Chain AY

Transfer RNA; tRNA