HL_5KPS_053
3D structure
- PDB id
- 5KPS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UGUCGAAAAA
- Length
- 10 nucleotides
- Bulged bases
- 5KPS|1|28|C|747, 5KPS|1|28|A|751
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5KPS_053 not in the Motif Atlas
- Homologous match to HL_4WF9_023
- Geometric discrepancy: 0.1758
- The information below is about HL_4WF9_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_88205.2
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
5KPS|1|28|U|744
5KPS|1|28|G|745
5KPS|1|28|U|746
5KPS|1|28|C|747
5KPS|1|28|G|748
5KPS|1|28|A|749
5KPS|1|28|A|750
5KPS|1|28|A|751
5KPS|1|28|A|752
5KPS|1|28|A|753
Current chains
- Chain 28
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L32
- Chain 4
- 50S ribosomal protein L34
- Chain C
- 50S ribosomal protein L3
- Chain D
- 50S ribosomal protein L4
- Chain S
- 50S ribosomal protein L22
Coloring options: