HL_5KPW_024
3D structure
- PDB id
- 5KPW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUUAAGUC
- Length
- 8 nucleotides
- Bulged bases
- 5KPW|1|26|G|1094
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5KPW_024 not in the Motif Atlas
- Homologous match to HL_4LFB_025
- Geometric discrepancy: 0.1323
- The information below is about HL_4LFB_025
- Detailed Annotation
- T-loop related
- Broad Annotation
- T-loop
- Motif group
- HL_63894.2
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 19
Unit IDs
5KPW|1|26|G|1089
5KPW|1|26|U|1090
5KPW|1|26|U|1091
5KPW|1|26|A|1092
5KPW|1|26|A|1093
5KPW|1|26|G|1094
5KPW|1|26|U|1095
5KPW|1|26|C|1096
Current chains
- Chain 26
- 16S ribosomal RNA
Nearby chains
- Chain 11
- 30S ribosomal protein S7
- Chain 25
- 30S ribosomal protein S21
- Chain 6
- 30S ribosomal protein S2
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