HL_5L3P_021

3D structure

PDB id

5L3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AU(1MG)(PSU)(5MC)GAAAAAU

Length

12 nucleotides

Bulged bases

5L3P|1|A|A|751, 5L3P|1|A|A|752

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5L3P|1|A|A|743
5L3P|1|A|U|744
5L3P|1|A|1MG|745
5L3P|1|A|PSU|746
5L3P|1|A|5MC|747
5L3P|1|A|G|748
5L3P|1|A|A|749
5L3P|1|A|A|750
5L3P|1|A|A|751
5L3P|1|A|A|752
5L3P|1|A|A|753
5L3P|1|A|U|754

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 5

50S ribosomal protein L32

Chain 7

50S ribosomal protein L34

Chain E

50S ribosomal protein L3

Chain F

50S ribosomal protein L4

Chain W

50S ribosomal protein L22