HL_5L3P_028

3D structure

PDB id

5L3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGACGCUUAUGCGUUG

Length

16 nucleotides

Bulged bases

5L3P|1|A|U|1174, 5L3P|1|A|A|1175

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5L3P|1|A|C|1167
5L3P|1|A|G|1168
5L3P|1|A|A|1169
5L3P|1|A|C|1170
5L3P|1|A|G|1171
5L3P|1|A|C|1172
5L3P|1|A|U|1173
5L3P|1|A|U|1174
5L3P|1|A|A|1175
5L3P|1|A|U|1176
5L3P|1|A|G|1177
5L3P|1|A|C|1178
5L3P|1|A|G|1179
5L3P|1|A|U|1180
5L3P|1|A|U|1181
5L3P|1|A|G|1182

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L30

Chain V

50S ribosomal protein L21