HL_5L3P_051

3D structure

PDB id

5L3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUG(OMG)GGCGG

Length

9 nucleotides

Bulged bases

5L3P|1|A|G|2250

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5L3P_051 not in the Motif Atlas

Homologous match to HL_5J7L_186

Geometric discrepancy: 0.1024

The information below is about HL_5J7L_186

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_85367.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

5L3P|1|A|C|2248
5L3P|1|A|U|2249
5L3P|1|A|G|2250
5L3P|1|A|OMG|2251
5L3P|1|A|G|2252
5L3P|1|A|G|2253
5L3P|1|A|C|2254
5L3P|1|A|G|2255
5L3P|1|A|G|2256

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L27

Chain Q

50S ribosomal protein L16

Chain x

Transfer RNA; tRNA