HL_5L3P_109

3D structure

PDB id

5L3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CACGCUUAGGCGUG

Length

14 nucleotides

Bulged bases

5L3P|1|A|A|547

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5L3P|1|A|C|540
5L3P|1|A|A|541
5L3P|1|A|C|542
5L3P|1|A|G|543
5L3P|1|A|C|544
5L3P|1|A|U|545
5L3P|1|A|U|546
5L3P|1|A|A|547
5L3P|1|A|G|548
5L3P|1|A|G|549
5L3P|1|A|C|550
5L3P|1|A|G|551
5L3P|1|A|U|552
5L3P|1|A|G|553

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain N

50S ribosomal protein L13

Chain U

50S ribosomal protein L20

Chain V

50S ribosomal protein L21