HL_5LKS_016

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUCUUGAAACAC

Length

12 nucleotides

Bulged bases

5LKS|1|L5|C|1325

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|G|1316
5LKS|1|L5|U|1317
5LKS|1|L5|C|1318
5LKS|1|L5|U|1319
5LKS|1|L5|U|1320
5LKS|1|L5|G|1321
5LKS|1|L5|A|1322
5LKS|1|L5|A|1323
5LKS|1|L5|A|1324
5LKS|1|L5|C|1325
5LKS|1|L5|A|1326
5LKS|1|L5|C|1327

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain La

60S ribosomal protein L27a

Chain Le

60S ribosomal protein L32