HL_5LKS_019

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCGGCGCGCUCGCCGG

Length

16 nucleotides

Bulged bases

5LKS|1|L5|C|1407, 5LKS|1|L5|U|1410

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|C|1401
5LKS|1|L5|C|1402
5LKS|1|L5|G|1403
5LKS|1|L5|G|1404
5LKS|1|L5|C|1405
5LKS|1|L5|G|1406
5LKS|1|L5|C|1407
5LKS|1|L5|G|1408
5LKS|1|L5|C|1409
5LKS|1|L5|U|1410
5LKS|1|L5|C|1411
5LKS|1|L5|G|1412
5LKS|1|L5|C|1413
5LKS|1|L5|C|1414
5LKS|1|L5|G|1415
5LKS|1|L5|G|1416

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain Lb

Ribosomal protein L29, isoform CRA_a