HL_5LKS_023

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GACGUGCAAAUC

Length

12 nucleotides

Bulged bases

5LKS|1|L5|U|1596, 5LKS|1|L5|A|1600

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|G|1592
5LKS|1|L5|A|1593
5LKS|1|L5|C|1594
5LKS|1|L5|G|1595
5LKS|1|L5|U|1596
5LKS|1|L5|G|1597
5LKS|1|L5|C|1598
5LKS|1|L5|A|1599
5LKS|1|L5|A|1600
5LKS|1|L5|A|1601
5LKS|1|L5|U|1602
5LKS|1|L5|C|1603

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LP

60S ribosomal protein L17

Chain Lj

60S ribosomal protein L37