HL_5LKS_026
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAUUAGAGGUCUUGGGGCCGAAACGAUCUCAACCUAUUCUC
- Length
- 41 nucleotides
- Bulged bases
- 5LKS|1|L5|U|1756, 5LKS|1|L5|A|1765, 5LKS|1|L5|A|1766
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|L5|G|1745
5LKS|1|L5|A|1746
5LKS|1|L5|U|1747
5LKS|1|L5|U|1748
5LKS|1|L5|A|1749
5LKS|1|L5|G|1750
5LKS|1|L5|A|1751
5LKS|1|L5|G|1752
5LKS|1|L5|G|1753
5LKS|1|L5|U|1754
5LKS|1|L5|C|1755
5LKS|1|L5|U|1756
5LKS|1|L5|U|1757
5LKS|1|L5|G|1758
5LKS|1|L5|G|1759
5LKS|1|L5|G|1760
5LKS|1|L5|G|1761
5LKS|1|L5|C|1762
5LKS|1|L5|C|1763
5LKS|1|L5|G|1764
5LKS|1|L5|A|1765
5LKS|1|L5|A|1766
5LKS|1|L5|A|1767
5LKS|1|L5|C|1768
5LKS|1|L5|G|1769
5LKS|1|L5|A|1770
5LKS|1|L5|U|1771
5LKS|1|L5|C|1772
5LKS|1|L5|U|1773
5LKS|1|L5|C|1774
5LKS|1|L5|A|1775
5LKS|1|L5|A|1776
5LKS|1|L5|C|1777
5LKS|1|L5|C|1778
5LKS|1|L5|U|1779
5LKS|1|L5|A|1780
5LKS|1|L5|U|1781
5LKS|1|L5|U|1782
5LKS|1|L5|C|1783
5LKS|1|L5|U|1784
5LKS|1|L5|C|1785
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LD
- 60S ribosomal protein L5
- Chain LI
- 60S ribosomal protein L10-like
- Chain LJ
- 60S ribosomal protein L11
- Chain SP
- 40S ribosomal protein S15
- Chain SS
- 40S ribosomal protein S18
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