HL_5LKS_027

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCUCGCUGGCGUGAGC

Length

16 nucleotides

Bulged bases

5LKS|1|L5|G|1815

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|G|1811
5LKS|1|L5|C|1812
5LKS|1|L5|U|1813
5LKS|1|L5|C|1814
5LKS|1|L5|G|1815
5LKS|1|L5|C|1816
5LKS|1|L5|U|1817
5LKS|1|L5|G|1818
5LKS|1|L5|G|1819
5LKS|1|L5|C|1820
5LKS|1|L5|G|1821
5LKS|1|L5|U|1822
5LKS|1|L5|G|1823
5LKS|1|L5|A|1825
5LKS|1|L5|G|1826
5LKS|1|L5|C|1827

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LD

60S ribosomal protein L5

Chain LT

60S ribosomal protein L21

Chain Lb

Ribosomal protein L29, isoform CRA_a