HL_5LKS_031
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAGUCGAGAGUGGACGGGAGCGGCGGGGGCGGCGCGCGCGCGCGCCCGCCCCCGGAGCCCCGCGGACGCUACG
- Length
- 73 nucleotides
- Bulged bases
- 5LKS|1|L5|G|2094, 5LKS|1|L5|G|2111, 5LKS|1|L5|G|2114, 5LKS|1|L5|C|2247, 5LKS|1|L5|G|2251, 5LKS|1|L5|G|2254, 5LKS|1|L5|G|2259, 5LKS|1|L5|G|2262, 5LKS|1|L5|U|2267, 5LKS|1|L5|C|2269
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|L5|C|2087
5LKS|1|L5|A|2088
5LKS|1|L5|G|2089
5LKS|1|L5|U|2090
5LKS|1|L5|C|2091
5LKS|1|L5|G|2092
5LKS|1|L5|A|2093
5LKS|1|L5|G|2094
5LKS|1|L5|A|2095
5LKS|1|L5|G|2096
5LKS|1|L5|U|2097
5LKS|1|L5|G|2098
5LKS|1|L5|G|2099
5LKS|1|L5|A|2100
5LKS|1|L5|C|2101
5LKS|1|L5|G|2102
5LKS|1|L5|G|2103
5LKS|1|L5|G|2104
5LKS|1|L5|A|2105
5LKS|1|L5|G|2106
5LKS|1|L5|C|2107
5LKS|1|L5|G|2108
5LKS|1|L5|G|2109
5LKS|1|L5|C|2110
5LKS|1|L5|G|2111
5LKS|1|L5|G|2112
5LKS|1|L5|G|2113
5LKS|1|L5|G|2114
5LKS|1|L5|G|2115
5LKS|1|L5|C|2116
5LKS|1|L5|G|2117
5LKS|1|L5|G|2118
5LKS|1|L5|C|2119
5LKS|1|L5|G|2120
5LKS|1|L5|C|2121
5LKS|1|L5|G|2122
5LKS|1|L5|C|2123
5LKS|1|L5|G|2124
5LKS|1|L5|C|2125
5LKS|1|L5|G|2126
5LKS|1|L5|C|2127
5LKS|1|L5|G|2128
5LKS|1|L5|C|2129
5LKS|1|L5|G|2130
5LKS|1|L5|C|2131
5LKS|1|L5|C|2243
5LKS|1|L5|C|2244
5LKS|1|L5|G|2245
5LKS|1|L5|C|2246
5LKS|1|L5|C|2247
5LKS|1|L5|C|2248
5LKS|1|L5|C|2249
5LKS|1|L5|C|2250
5LKS|1|L5|G|2251
5LKS|1|L5|G|2252
5LKS|1|L5|A|2253
5LKS|1|L5|G|2254
5LKS|1|L5|C|2255
5LKS|1|L5|C|2256
5LKS|1|L5|C|2257
5LKS|1|L5|C|2258
5LKS|1|L5|G|2259
5LKS|1|L5|C|2260
5LKS|1|L5|G|2261
5LKS|1|L5|G|2262
5LKS|1|L5|A|2263
5LKS|1|L5|C|2264
5LKS|1|L5|G|2265
5LKS|1|L5|C|2266
5LKS|1|L5|U|2267
5LKS|1|L5|A|2268
5LKS|1|L5|C|2269
5LKS|1|L5|G|2270
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
- Chain LE
- 60S ribosomal protein L6
- Chain LF
- 60S ribosomal protein L7
- Chain LQ
- 60S ribosomal protein L18
- Chain Le
- 60S ribosomal protein L32
- Chain Lr
- 60S ribosomal protein L28
Coloring options: