HL_5LKS_054

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAGCCCCGAGGGGCUC

Length

16 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|G|4097
5LKS|1|L5|A|4098
5LKS|1|L5|G|4099
5LKS|1|L5|C|4100
5LKS|1|L5|C|4101
5LKS|1|L5|C|4102
5LKS|1|L5|C|4103
5LKS|1|L5|G|4104
5LKS|1|L5|A|4105
5LKS|1|L5|G|4106
5LKS|1|L5|G|4107
5LKS|1|L5|G|4108
5LKS|1|L5|G|4109
5LKS|1|L5|C|4110
5LKS|1|L5|U|4111
5LKS|1|L5|C|4112

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LG

60S ribosomal protein L7a

Chain Lg

60S ribosomal protein L34

Chain SB

40S ribosomal protein S3a