HL_5LKS_056

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GACUGGGGCGGUAC

Length

14 nucleotides

Bulged bases

5LKS|1|L5|G|4195

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|G|4191
5LKS|1|L5|A|4192
5LKS|1|L5|C|4193
5LKS|1|L5|U|4194
5LKS|1|L5|G|4195
5LKS|1|L5|G|4196
5LKS|1|L5|G|4197
5LKS|1|L5|G|4198
5LKS|1|L5|C|4199
5LKS|1|L5|G|4200
5LKS|1|L5|G|4201
5LKS|1|L5|U|4202
5LKS|1|L5|A|4203
5LKS|1|L5|C|4204

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LI

60S ribosomal protein L10-like

Chain LT

60S ribosomal protein L21

Chain Lb

Ribosomal protein L29, isoform CRA_a

Chain Lo

60S ribosomal protein L36a