HL_5LKS_084

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAGUGGUGACUCUAG

Length

15 nucleotides

Bulged bases

5LKS|1|S2|A|292, 5LKS|1|S2|U|294

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|S2|C|223
5LKS|1|S2|A|224
5LKS|1|S2|G|225
5LKS|1|S2|U|287
5LKS|1|S2|G|288
5LKS|1|S2|G|289
5LKS|1|S2|U|290
5LKS|1|S2|G|291
5LKS|1|S2|A|292
5LKS|1|S2|C|293
5LKS|1|S2|U|294
5LKS|1|S2|C|295
5LKS|1|S2|U|296
5LKS|1|S2|A|297
5LKS|1|S2|G|298

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SE

40S ribosomal protein S4, X isoform

Chain SG

40S ribosomal protein S6

Chain SI

40S ribosomal protein S8

Chain SL

40S ribosomal protein S11