HL_5LKS_090

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCCGACCCGGG

Length

11 nucleotides

Bulged bases

5LKS|1|S2|A|500, 5LKS|1|S2|C|502, 5LKS|1|S2|C|503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|S2|C|496
5LKS|1|S2|C|497
5LKS|1|S2|C|498
5LKS|1|S2|G|499
5LKS|1|S2|A|500
5LKS|1|S2|C|501
5LKS|1|S2|C|502
5LKS|1|S2|C|503
5LKS|1|S2|G|504
5LKS|1|S2|G|505
5LKS|1|S2|G|506

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SE

40S ribosomal protein S4, X isoform

Chain SY

40S ribosomal protein S24