HL_5LKS_091

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GACUCUUUCGAGGC

Length

14 nucleotides

Bulged bases

5LKS|1|S2|A|536, 5LKS|1|S2|C|539

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|S2|G|535
5LKS|1|S2|A|536
5LKS|1|S2|C|537
5LKS|1|S2|U|538
5LKS|1|S2|C|539
5LKS|1|S2|U|540
5LKS|1|S2|U|541
5LKS|1|S2|U|542
5LKS|1|S2|C|543
5LKS|1|S2|G|544
5LKS|1|S2|A|545
5LKS|1|S2|G|546
5LKS|1|S2|G|547
5LKS|1|S2|C|548

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain Se

Ribosomal protein S30