HL_5LKS_095

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUAUUUUGUUGGUUUUCGG

Length

19 nucleotides

Bulged bases

5LKS|1|S2|U|889, 5LKS|1|S2|G|891, 5LKS|1|S2|U|892, 5LKS|1|S2|U|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|S2|C|884
5LKS|1|S2|U|885
5LKS|1|S2|A|886
5LKS|1|S2|U|887
5LKS|1|S2|U|888
5LKS|1|S2|U|889
5LKS|1|S2|U|890
5LKS|1|S2|G|891
5LKS|1|S2|U|892
5LKS|1|S2|U|893
5LKS|1|S2|G|894
5LKS|1|S2|G|895
5LKS|1|S2|U|896
5LKS|1|S2|U|897
5LKS|1|S2|U|898
5LKS|1|S2|U|899
5LKS|1|S2|C|900
5LKS|1|S2|G|901
5LKS|1|S2|G|902

Current chains

Chain S2

18S ribosomal RNA

Nearby chains