HL_5LKS_120

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAGUUCUCUUUUC

Length

13 nucleotides

Bulged bases

5LKS|1|L5|U|2631

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|G|2622
5LKS|1|L5|A|2623
5LKS|1|L5|G|2624
5LKS|1|L5|U|2625
5LKS|1|L5|U|2626
5LKS|1|L5|C|2627
5LKS|1|L5|U|2628
5LKS|1|L5|C|2629
5LKS|1|L5|U|2630
5LKS|1|L5|U|2631
5LKS|1|L5|U|2632
5LKS|1|L5|U|2633
5LKS|1|L5|C|2634

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LR

60S ribosomal protein L19

Chain LU

60S ribosomal protein L22