HL_5LKS_121

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCGUCGCGGUUCCGGCGGCGU

Length

21 nucleotides

Bulged bases

5LKS|1|L5|U|2707, 5LKS|1|L5|U|2708, 5LKS|1|L5|C|2709, 5LKS|1|L5|G|2711

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|G|2698
5LKS|1|L5|C|2699
5LKS|1|L5|G|2700
5LKS|1|L5|U|2701
5LKS|1|L5|C|2702
5LKS|1|L5|G|2703
5LKS|1|L5|C|2704
5LKS|1|L5|G|2705
5LKS|1|L5|G|2706
5LKS|1|L5|U|2707
5LKS|1|L5|U|2708
5LKS|1|L5|C|2709
5LKS|1|L5|C|2710
5LKS|1|L5|G|2711
5LKS|1|L5|G|2712
5LKS|1|L5|C|2713
5LKS|1|L5|G|2714
5LKS|1|L5|G|2715
5LKS|1|L5|C|2716
5LKS|1|L5|G|2717
5LKS|1|L5|U|2718

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LR

60S ribosomal protein L19

Chain LU

60S ribosomal protein L22

Chain LX

60S ribosomal protein L23a

Chain Lg

60S ribosomal protein L34

Chain Lk

60S ribosomal protein L38