HL_5LKS_133
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UACGCACGGCCGGUACAGUGAAA
- Length
- 23 nucleotides
- Bulged bases
- 5LKS|1|S2|C|65, 5LKS|1|S2|C|67, 5LKS|1|S2|C|72, 5LKS|1|S2|G|75, 5LKS|1|S2|U|76
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|S2|U|63
5LKS|1|S2|A|64
5LKS|1|S2|C|65
5LKS|1|S2|G|66
5LKS|1|S2|C|67
5LKS|1|S2|A|68
5LKS|1|S2|C|69
5LKS|1|S2|G|70
5LKS|1|S2|G|71
5LKS|1|S2|C|72
5LKS|1|S2|C|73
5LKS|1|S2|G|74
5LKS|1|S2|G|75
5LKS|1|S2|U|76
5LKS|1|S2|A|77
5LKS|1|S2|C|78
5LKS|1|S2|A|79
5LKS|1|S2|G|80
5LKS|1|S2|U|81
5LKS|1|S2|G|82
5LKS|1|S2|A|83
5LKS|1|S2|A|84
5LKS|1|S2|A|85
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain LW
- 60S ribosomal protein L24
- Chain SG
- 40S ribosomal protein S6
- Chain SY
- 40S ribosomal protein S24
Coloring options: