HL_5LKS_135
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CCACUCCCGACCCGGGGAG
- Length
- 19 nucleotides
- Bulged bases
- 5LKS|1|S2|A|493, 5LKS|1|S2|A|500, 5LKS|1|S2|C|502, 5LKS|1|S2|C|503, 5LKS|1|S2|G|507
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|S2|C|491
5LKS|1|S2|C|492
5LKS|1|S2|A|493
5LKS|1|S2|C|494
5LKS|1|S2|U|495
5LKS|1|S2|C|496
5LKS|1|S2|C|497
5LKS|1|S2|C|498
5LKS|1|S2|G|499
5LKS|1|S2|A|500
5LKS|1|S2|C|501
5LKS|1|S2|C|502
5LKS|1|S2|C|503
5LKS|1|S2|G|504
5LKS|1|S2|G|505
5LKS|1|S2|G|506
5LKS|1|S2|G|507
5LKS|1|S2|A|508
5LKS|1|S2|G|509
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SE
- 40S ribosomal protein S4, X isoform
- Chain SJ
- 40S ribosomal protein S9
- Chain SY
- 40S ribosomal protein S24
Coloring options: