HL_5LKS_137
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GACAGGAUUGACAGAUUGAUAGCUCUUUCUCGAUUC
- Length
- 36 nucleotides
- Bulged bases
- 5LKS|1|S2|G|1285, 5LKS|1|S2|G|1294, 5LKS|1|S2|U|1300, 5LKS|1|S2|U|1306, 5LKS|1|S2|U|1314
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|S2|G|1281
5LKS|1|S2|A|1282
5LKS|1|S2|C|1283
5LKS|1|S2|A|1284
5LKS|1|S2|G|1285
5LKS|1|S2|G|1286
5LKS|1|S2|A|1287
5LKS|1|S2|U|1288
5LKS|1|S2|U|1289
5LKS|1|S2|G|1290
5LKS|1|S2|A|1291
5LKS|1|S2|C|1292
5LKS|1|S2|A|1293
5LKS|1|S2|G|1294
5LKS|1|S2|A|1295
5LKS|1|S2|U|1296
5LKS|1|S2|U|1297
5LKS|1|S2|G|1298
5LKS|1|S2|A|1299
5LKS|1|S2|U|1300
5LKS|1|S2|A|1301
5LKS|1|S2|G|1302
5LKS|1|S2|C|1303
5LKS|1|S2|U|1304
5LKS|1|S2|C|1305
5LKS|1|S2|U|1306
5LKS|1|S2|U|1307
5LKS|1|S2|U|1308
5LKS|1|S2|C|1309
5LKS|1|S2|U|1310
5LKS|1|S2|C|1311
5LKS|1|S2|G|1312
5LKS|1|S2|A|1313
5LKS|1|S2|U|1314
5LKS|1|S2|U|1315
5LKS|1|S2|C|1316
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SK
- 40S ribosomal protein S10
- Chain SM
- 40S ribosomal protein S12
- Chain SP
- 40S ribosomal protein S15
- Chain Sd
- 40S ribosomal protein S29
- Chain Sf
- Ubiquitin-40S ribosomal protein S27a
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