HL_5LKS_138

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUGGUUAAUUCCG

Length

13 nucleotides

Bulged bases

5LKS|1|S2|U|1371

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|S2|C|1363
5LKS|1|S2|U|1364
5LKS|1|S2|G|1365
5LKS|1|S2|G|1366
5LKS|1|S2|U|1367
5LKS|1|S2|U|1368
5LKS|1|S2|A|1369
5LKS|1|S2|A|1370
5LKS|1|S2|U|1371
5LKS|1|S2|U|1372
5LKS|1|S2|C|1373
5LKS|1|S2|C|1374
5LKS|1|S2|G|1375

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SR

40S ribosomal protein S17